BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016D08LP1|AL427006
(880 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1302 1736 0.0
>3x_Contig1302
Length = 5215
Score = 1736 bits (874), Expect = 0.0
Identities = 877/880 (99%)
Strand = Plus / Plus
Query: 1 gatcgaaaaccaatgccaatttatacgttttctcgttccccaccccgttcggttcgctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2698 gatcgaaaaccaatgccaatttatacgttttctcgttccccaccccgttcggttcgctgc 2757
Query: 61 cacttcacacaaaaaaaaaaacagtaaaaataggtctctttgtcagataccatacccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2758 cacttcacacaaaaaaaaaaacagtaaaaataggtctctttgtcagataccatacccatt 2817
Query: 121 acaacatggtacgtgtaatttcccaactttaccaaacaattgacgaactattgcacgcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2818 acaacatggtacgtgtaatttcccaactttaccaaacaattgacgaactattgcacgcaa 2877
Query: 181 gcagattccctgtcactcactcttacaagcggtagcagttcaagcccgagctcaattcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2878 gcagattccctgtcactcactcttacaagcggtagcagttcaagcccgagctcaattcac 2937
Query: 241 gttaatcgtgtttccattctccgagataaatgagaaaagtatgattaahaaattgatgct 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2938 gttaatcgtgtttccattctccgagataaatgagaaaagtatgattaaaaaattgatgct 2997
Query: 301 gacttactcaaaattaccggcaataaaaaaaaaaaggacgtagcagtagaactcagcgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2998 gacttactcaaaattaccggcaataaaaaaaaaaaggacgtagcagtagaactcagcgtt 3057
Query: 361 gacagataattcaacgagaccaaaaagaaaaattgggatgagagtggactaaccaaaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3058 gacagataattcaacgagaccaaaaagaaaaattgggatgagagtggactaaccaaaaaa 3117
Query: 421 aaaagaacattgcagcctctcccaaccagactagaactccgcatcctgtataatggagtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3118 aaaagaacattgcagcctctcccaaccagactagaactccgcatcctgtataatggagtt 3177
Query: 481 acacaacaatctggaagtgacccctctatgtttttctactctccacctggaatactgtgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3178 acacaacaatctggaagtgacccctctatgtttttctactctccacctggaatactgtgc 3237
Query: 541 tgtttcagttgatgtgctcattttttttttgcattggtcttagtcgttacccaatttcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3238 tgtttcagttgatgtgctcattttttttttgcattggtcttagtcgttacccaatttcaa 3297
Query: 601 gaataactggaaaaatttggcaatcggacccctccacacgatgcattttagttggatggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3298 gaataactggaaaaatttggcaatcggacccctccacacgatgcattttagttggatggt 3357
Query: 661 tgaaatgagatggtgctcgttccgatgattagtccaggaatcgggcattgacggttgccg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3358 tgaaatgagatggtgctcgttccgatgattagtccaggaatcgggcattgacggttgccg 3417
Query: 721 agttgtgcatcactacgggtttgatgtagaaactccgattttacatcgggtagactttgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3418 agttgtgcatcactacgggtttgatgtagaaactccgattttacatcgggtagactttgg 3477
Query: 781 ggagattttkttctttctgctctcagtgatttttcaaatttaggttggtgaagcgggggs 840
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3478 ggagattttgttctttctgctctcagtgatttttcaaatttaggttggtgaagcgggggc 3537
Query: 841 gggggagagctgttagagatggctcggaattttcctgggc 880
||||||||||||||||||||||||||||||||||||||||
Sbjct: 3538 gggggagagctgttagagatggctcggaattttcctgggc 3577
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 18,799
Number of Sequences: 1807
Number of extensions: 18799
Number of successful extensions: 110
Number of sequences better than 1.0e-20: 1
length of query: 880
length of database: 10,358,551
effective HSP length: 16
effective length of query: 864
effective length of database: 10,329,639
effective search space: 8924808096
effective search space used: 8924808096
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)